[,PWMEmpiricalBackground-method

drop


  Get the background for a subset of PWMs


A toolkit of high-level functions for DNA motif scanning
and enrichment analysis built upon Biostrings. The main
functionality is PWM enrichment analysis of already known PWMs
(e.g. from databases such as MotifDb), but the package also
implements high-level functions for PWM scanning and
visualisation. The package does not perform "de novo" motif
discovery, but is instead focused on using motifs that are
either experimentally derived or computationally constructed by
other tools.

[,PWMEmpiricalBackground-method: Get the background for a subset of PWMs

Description

Arguments